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    LOC119449617 putative oxidoreductase GLYR1 homolog [ Dermacentor silvarum ]

    Gene ID: 119449617, updated on 1-Jul-2024

    Summary

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    Gene symbol
    LOC119449617
    Gene description
    putative oxidoreductase GLYR1 homolog
    See related
    VectorBase:DSIL_089658; EnsemblRapid:LOC119449617
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dermacentor silvarum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Dermacentor
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC119449617 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    101 current BIME_Dsil_1.4 (GCF_013339745.2) 4 NC_051157.2 (21759007..21862103)
    100 previous assembly ASM1333974v1 (GCF_013339745.1) 4 NC_051157.1 (21759018..21862103)

    Chromosome 4 - NC_051157.2Genomic Context describing neighboring genes Neighboring gene lysosome membrane protein 2-like Neighboring gene STAGA complex 65 subunit gamma-like Neighboring gene leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3 Neighboring gene AF4/FMR2 family member 4-like Neighboring gene beta-1,4-glucuronyltransferase 1 Neighboring gene uncharacterized LOC119449620

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative oxidoreductase GLYR1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dermacentor silvarum Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BIME_Dsil_1.4 Primary Assembly

    Genomic

    1. NC_051157.2 Reference BIME_Dsil_1.4 Primary Assembly

      Range
      21759007..21862103
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037712829.2 → XP_037568757.1  putative oxidoreductase GLYR1 homolog isoform X1

      Related
      XP_037568757.1, XM_037712829.2
      Conserved Domains (3) summary
      COG2084
      Location:276 → 555
      MmsB; 3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase [Lipid transport and metabolism]
      NF033201
      Location:76 → 172
      Vip_LPXTG_Lm; cell invasion LPXTG protein Vip
      cl02554
      Location:5 → 90
      PWWP; The PWWP domain, named for a conserved Pro-Trp-Trp-Pro motif, is a small domain consisting of 100-150 amino acids. The PWWP domain is found in numerous proteins that are involved in cell division, growth and differentiation. Most PWWP-domain proteins ...

    2. XM_037712830.2 → XP_037568758.1  putative oxidoreductase GLYR1 homolog isoform X2

      Related
      XP_037568758.1, XM_037712830.2
      Conserved Domains (2) summary
      COG2084
      Location:243 → 522
      MmsB; 3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase [Lipid transport and metabolism]
      cl02554
      Location:5 → 90
      PWWP; The PWWP domain, named for a conserved Pro-Trp-Trp-Pro motif, is a small domain consisting of 100-150 amino acids. The PWWP domain is found in numerous proteins that are involved in cell division, growth and differentiation. Most PWWP-domain proteins ...
    Nucleotide Protein
    Heading Accession and Version

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