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    lsm14b LSM family member 14B [ Perca fluviatilis (European perch) ]

    Gene ID: 120558695, updated on 10-Jul-2024

    Summary

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    Gene symbol
    lsm14b
    Gene description
    LSM family member 14B
    Locus tag
    PFLUV_G00056340
    See related
    EnsemblRapid:ENSPFLG00020018936
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Perca fluviatilis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
    Orthologs
    human zebrafish all
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    Genomic context

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    See lsm14b in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current GENO_Pfluv_1.0 (GCF_010015445.1) 5 NC_053116.1 (15682257..15686191)

    Chromosome 5 - NC_053116.1Genomic Context describing neighboring genes Neighboring gene cadherin-4-like Neighboring gene transcription initiation factor TFIID subunit 4-like Neighboring gene calcium-responsive transactivator-like Neighboring gene mitochondrial ribosome-associated GTPase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053116.1 Chromosome 5 Reference GENO_Pfluv_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein LSM14 homolog B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Perca fluviatilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GENO_Pfluv_1.0

    Genomic

    1. NC_053116.1 Reference GENO_Pfluv_1.0

      Range
      15682257..15686191
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039799841.1 → XP_039655775.1  protein LSM14 homolog B isoform X2

      Related
      ENSPFLP00020046111.1, ENSPFLT00020052392.1
      Conserved Domains (2) summary
      cd01736
      Location:6 → 77
      LSm14_N; Like-Sm protein 14, N-terminal domain
      pfam09532
      Location:245 → 332
      FDF; FDF domain

    2. XM_039799840.1 → XP_039655774.1  protein LSM14 homolog B isoform X1

      UniProtKB/TrEMBL
      A0A6A5ELZ2
      Conserved Domains (2) summary
      pfam09532
      Location:250 → 337
      FDF; FDF domain
      pfam12701
      Location:6 → 80
      LSM14; Scd6-like Sm domain
    Nucleotide Protein
    Heading Accession and Version

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