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    RNF152 ring finger protein 152 [ Pteropus giganteus (Indian flying fox) ]

    Gene ID: 120584552, updated on 25-Dec-2024

    Summary

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    Gene symbol
    RNF152
    Gene description
    ring finger protein 152
    See related
    EnsemblRapid:ENSPGIG00000021858
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pteropus giganteus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
    Orthologs
    human mouse all
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    Genomic context

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    See RNF152 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Ma_sr-lr_union100 (GCF_902729225.1) Unplaced Scaffold NW_024340849.1 (10113744..10184034)

    NW_024340849.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing Neighboring gene phosphatidylinositol glycan anchor biosynthesis class N Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC120584572

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024340849 Unplaced Scaffold Reference Ma_sr-lr_union100

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to amino acid starvation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of TORC1 signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF152

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pteropus giganteus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ma_sr-lr_union100

    Genomic

    1. NW_024340849.1 Reference Ma_sr-lr_union100

      Range
      10113744..10184034
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039840271.1 → XP_039696205.1  E3 ubiquitin-protein ligase RNF152

      Conserved Domains (1) summary
      cd16548
      Location:11 → 55
      RING-HC_RNF152; RING finger, HC subclass, found in RING finger protein 152 (RNF152) and similar proteins

    2. XM_039840255.1 → XP_039696189.1  E3 ubiquitin-protein ligase RNF152

      Conserved Domains (1) summary
      cd16548
      Location:11 → 55
      RING-HC_RNF152; RING finger, HC subclass, found in RING finger protein 152 (RNF152) and similar proteins

    3. XM_039840279.1 → XP_039696213.1  E3 ubiquitin-protein ligase RNF152

      Conserved Domains (1) summary
      cd16548
      Location:11 → 55
      RING-HC_RNF152; RING finger, HC subclass, found in RING finger protein 152 (RNF152) and similar proteins

    4. XM_039840263.1 → XP_039696197.1  E3 ubiquitin-protein ligase RNF152

      Conserved Domains (1) summary
      cd16548
      Location:11 → 55
      RING-HC_RNF152; RING finger, HC subclass, found in RING finger protein 152 (RNF152) and similar proteins

    5. XM_039840289.1 → XP_039696223.1  E3 ubiquitin-protein ligase RNF152

      Related
      ENSPGIP00000018761.1, ENSPGIT00000028557.1
      Conserved Domains (1) summary
      cd16548
      Location:11 → 55
      RING-HC_RNF152; RING finger, HC subclass, found in RING finger protein 152 (RNF152) and similar proteins

    RNA

    1. XR_005648074.1 RNA Sequence

    2. XR_005648073.1 RNA Sequence

    3. XR_005648076.1 RNA Sequence

    4. XR_005648077.1 RNA Sequence

    5. XR_005648075.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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