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    LOC120917226 potassium voltage-gated channel subfamily KQT member 1-like [ Rana temporaria (common frog) ]

    Gene ID: 120917226, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120917226
    Gene description
    potassium voltage-gated channel subfamily KQT member 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rana temporaria
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC120917226 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current aRanTem1.1 (GCF_905171775.1) 11 NC_053499.1 (38756397..38766942, complement)

    Chromosome 11 - NC_053499.1Genomic Context describing neighboring genes Neighboring gene leucine zipper protein 2 Neighboring gene U2 spliceosomal RNA Neighboring gene phosphatidylserine synthase 2 Neighboring gene synaptotagmin 12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053499.1 Chromosome 11 Reference aRanTem1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables voltage-gated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated potassium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    potassium voltage-gated channel subfamily KQT member 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference aRanTem1.1

    Genomic

    1. NC_053499.1 Reference aRanTem1.1

      Range
      38756397..38766942 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040328361.1 → XP_040184295.1  potassium voltage-gated channel subfamily KQT member 1-like

      Conserved Domains (1) summary
      PLN03192
      Location:290 → 366
      PLN03192; Voltage-dependent potassium channel; Provisional
    Nucleotide Protein
    Heading Accession and Version

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