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    INPP5D inositol polyphosphate-5-phosphatase D [ Ochotona curzoniae (black-lipped pika) ]

    Gene ID: 121151106, updated on 22-Mar-2024

    Summary

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    Gene symbol
    INPP5D
    Gene description
    inositol polyphosphate-5-phosphatase D
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ochotona curzoniae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
    Orthologs
    human mouse all
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    Genomic context

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    See INPP5D in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    100 current NIBS_Ocur_1.0 (GCF_017591425.1) Unplaced Scaffold NW_024465405.1 (1776577..1882211)

    NW_024465405.1Genomic Context describing neighboring genes Neighboring gene kallikrein-5-like Neighboring gene neuraminidase 2 Neighboring gene uncharacterized LOC121151107 Neighboring gene autophagy related 16 like 1 Neighboring gene small Cajal body-specific RNA 6 Neighboring gene small Cajal body-specific RNA 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024465405 Unplaced Scaffold Reference NIBS_Ocur_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phosphatidylinositol dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ochotona curzoniae Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NIBS_Ocur_1.0 Primary Assembly

    Genomic

    1. NW_024465405.1 Reference NIBS_Ocur_1.0 Primary Assembly

      Range
      1776577..1882211
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040972316.1 → XP_040828250.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X5

      Conserved Domains (2) summary
      cd09100
      Location:400 → 706
      INPP5c_SHIP1-INPP5D; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins
      cd10343
      Location:1 → 102
      SH2_SHIP; Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)

    2. XM_040972315.1 → XP_040828249.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X4

      Conserved Domains (2) summary
      cd09100
      Location:399 → 705
      INPP5c_SHIP1-INPP5D; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins
      cd10343
      Location:1 → 102
      SH2_SHIP; Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)

    3. XM_040972312.1 → XP_040828246.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X1

      Conserved Domains (2) summary
      cd09100
      Location:399 → 705
      INPP5c_SHIP1-INPP5D; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins
      cd10343
      Location:1 → 102
      SH2_SHIP; Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)

    4. XM_040972314.1 → XP_040828248.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X3

      Conserved Domains (2) summary
      cd09100
      Location:399 → 705
      INPP5c_SHIP1-INPP5D; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins
      cd10343
      Location:1 → 102
      SH2_SHIP; Src homology 2 (SH2) domain found in SH2-containing inositol-5'-phosphatase (SHIP) and SLAM-associated protein (SAP)

    5. XM_040972313.1 → XP_040828247.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 isoform X2

      Conserved Domains (2) summary
      cd09100
      Location:327 → 633
      INPP5c_SHIP1-INPP5D; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins
      cl15255
      Location:1 → 30
      SH2; Src homology 2 (SH2) domain
    Nucleotide Protein
    Heading Accession and Version

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