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    Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [ Dipodomys spectabilis (banner-tailed kangaroo rat) ]

    Gene ID: 122121501, updated on 22-Mar-2024

    Summary

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    Gene symbol
    Pik3cd
    Gene description
    phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dipodomys spectabilis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
    Orthologs
    human mouse all
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    Genomic context

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    See Pik3cd in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    100 current ASM1905484v1 (GCF_019054845.1) Unplaced Scaffold NW_024870865.1 (2218326..2265393)

    NW_024870865.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 33 Neighboring gene transmembrane protein 201 Neighboring gene calsyntenin 1 Neighboring gene U6 spliceosomal RNA Neighboring gene catenin beta interacting protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024870865 Unplaced Scaffold Reference ASM1905484v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol-3-kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables 1-phosphatidylinositol-4-phosphate 3-kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphatidylinositol 3-kinase/protein kinase B signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphatidylinositol-3-phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phosphatidylinositol-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of phosphatidylinositol 3-kinase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dipodomys spectabilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1905484v1

    Genomic

    1. NW_024870865.1 Reference ASM1905484v1

      Range
      2218326..2265393
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042695767.1 → XP_042551701.1  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1

      Conserved Domains (5) summary
      cd08693
      Location:314 → 481
      C2_PI3K_class_I_beta_delta; C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks)
      smart00145
      Location:504 → 684
      PI3Ka; Phosphoinositide 3-kinase family, accessory domain (PIK domain)
      cd05174
      Location:676 → 1042
      PI3Kc_IA_delta; Catalytic domain of Class IA Phosphoinositide 3-kinase delta
      cl02483
      Location:31 → 108
      PI3K_p85B; PI3-kinase family, p85-binding domain
      cl02484
      Location:184 → 277
      PI3K_rbd; PI3-kinase family, ras-binding domain

    2. XM_042695768.1 → XP_042551702.1  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1

      Conserved Domains (5) summary
      cd08693
      Location:314 → 481
      C2_PI3K_class_I_beta_delta; C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks)
      smart00145
      Location:504 → 684
      PI3Ka; Phosphoinositide 3-kinase family, accessory domain (PIK domain)
      cd05174
      Location:676 → 1042
      PI3Kc_IA_delta; Catalytic domain of Class IA Phosphoinositide 3-kinase delta
      cl02483
      Location:31 → 108
      PI3K_p85B; PI3-kinase family, p85-binding domain
      cl02484
      Location:184 → 277
      PI3K_rbd; PI3-kinase family, ras-binding domain

    3. XM_042695766.1 → XP_042551700.1  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1

      Conserved Domains (5) summary
      cd08693
      Location:314 → 481
      C2_PI3K_class_I_beta_delta; C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks)
      smart00145
      Location:504 → 684
      PI3Ka; Phosphoinositide 3-kinase family, accessory domain (PIK domain)
      cd05174
      Location:676 → 1042
      PI3Kc_IA_delta; Catalytic domain of Class IA Phosphoinositide 3-kinase delta
      cl02483
      Location:31 → 108
      PI3K_p85B; PI3-kinase family, p85-binding domain
      cl02484
      Location:184 → 277
      PI3K_rbd; PI3-kinase family, ras-binding domain

    4. XM_042695769.1 → XP_042551703.1  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X2

      Conserved Domains (5) summary
      cd08693
      Location:314 → 481
      C2_PI3K_class_I_beta_delta; C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks)
      smart00145
      Location:505 → 683
      PI3Ka; Phosphoinositide 3-kinase family, accessory domain (PIK domain)
      cd05174
      Location:675 → 1041
      PI3Kc_IA_delta; Catalytic domain of Class IA Phosphoinositide 3-kinase delta
      cl02483
      Location:31 → 108
      PI3K_p85B; PI3-kinase family, p85-binding domain
      cl02484
      Location:184 → 277
      PI3K_rbd; PI3-kinase family, ras-binding domain
    Nucleotide Protein
    Heading Accession and Version

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