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    BLNK B cell linker [ Centrocercus urophasianus (Greater sage-grouse) ]

    Gene ID: 122160206, updated on 11-Apr-2024

    Summary

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    Gene symbol
    BLNK
    Gene description
    B cell linker
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Centrocercus urophasianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Centrocercus
    Orthologs
    human mouse all
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    Genomic context

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    See BLNK in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    100 current USGS_Curo_1.0 (GCF_019232065.1) Unplaced Scaffold NW_024884722.1 (14197457..14291732)

    NW_024884722.1Genomic Context describing neighboring genes Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 1-like Neighboring gene DNA nucleotidylexotransferase Neighboring gene zinc finger protein 518A Neighboring gene cyclin J

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024884722 Unplaced Scaffold Reference USGS_Curo_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    B-cell linker protein

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Centrocercus urophasianus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USGS_Curo_1.0

    Genomic

    1. NW_024884722.1 Reference USGS_Curo_1.0

      Range
      14197457..14291732
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042818539.1 → XP_042674473.1  B-cell linker protein isoform X1

      Conserved Domains (3) summary
      cd09929
      Location:478 → 598
      SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)
      PHA03247
      Location:140 → 468
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:10 → 75
      SAM_superfamily; SAM (Sterile alpha motif )

    2. XM_042818541.1 → XP_042674475.1  B-cell linker protein isoform X3

      Conserved Domains (2) summary
      cd09929
      Location:457 → 577
      SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)
      PHA03247
      Location:119 → 447
      PHA03247; large tegument protein UL36; Provisional

    3. XM_042818540.1 → XP_042674474.1  B-cell linker protein isoform X2

      Conserved Domains (3) summary
      cd09929
      Location:459 → 579
      SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)
      PHA03247
      Location:121 → 449
      PHA03247; large tegument protein UL36; Provisional
      cl15755
      Location:10 → 75
      SAM_superfamily; SAM (Sterile alpha motif )

    4. XM_042818542.1 → XP_042674476.1  B-cell linker protein isoform X4

      Conserved Domains (2) summary
      cd09929
      Location:436 → 556
      SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)
      PHA03247
      Location:98 → 426
      PHA03247; large tegument protein UL36; Provisional

    5. XM_042818543.1 → XP_042674477.1  B-cell linker protein isoform X5

      Conserved Domains (2) summary
      cd09929
      Location:432 → 552
      SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)
      PHA03247
      Location:94 → 422
      PHA03247; large tegument protein UL36; Provisional

    6. XM_042818544.1 → XP_042674478.1  B-cell linker protein isoform X6

      Conserved Domains (2) summary
      cd09929
      Location:413 → 533
      SH2_BLNK_SLP-76; Src homology 2 (SH2) domain found in B-cell linker (BLNK) protein and SH2 domain-containing leukocyte protein of 76 kDa (SLP-76)
      PHA03247
      Location:75 → 403
      PHA03247; large tegument protein UL36; Provisional
    Nucleotide Protein
    Heading Accession and Version

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