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    DIS3L2 DIS3 like 3'-5' exoribonuclease 2 [ Prionailurus bengalensis (leopard cat) ]

    Gene ID: 122481909, updated on 11-Apr-2024

    Summary

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    Gene symbol
    DIS3L2
    Gene description
    DIS3 like 3'-5' exoribonuclease 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Prionailurus bengalensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Prionailurus
    Orthologs
    human mouse all
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    Genomic context

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    See DIS3L2 in Genome Data Viewer
    Location:
    chromosome: C1
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    100 current Fcat_Pben_1.1_paternal_pri (GCF_016509475.1) C1 NC_057345.1 (215012377..215361032)

    Chromosome C1 - NC_057345.1Genomic Context describing neighboring genes Neighboring gene pre-B-cell leukemia transcription factor 2-like Neighboring gene natriuretic peptide C Neighboring gene small nucleolar RNA U3 Neighboring gene U6 spliceosomal RNA Neighboring gene alkaline phosphatase, intestinal Neighboring gene endothelin converting enzyme like 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057345.1 Chromosome C1 Reference Fcat_Pben_1.1_paternal_pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3'-5'-RNA exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in miRNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of exosome (RNase complex) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DIS3-like exonuclease 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Prionailurus bengalensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Fcat_Pben_1.1_paternal_pri Primary Assembly

    Genomic

    1. NC_057345.1 Reference Fcat_Pben_1.1_paternal_pri Primary Assembly

      Range
      215012377..215361032
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043578169.1 → XP_043434104.1  DIS3-like exonuclease 2 isoform X2

      Conserved Domains (2) summary
      COG0557
      Location:226 → 734
      VacB; Exoribonuclease R [Transcription]
      pfam17216
      Location:50 → 238
      Rrp44_CSD1; Rrp44-like cold shock domain

    2. XM_043578167.1 → XP_043434102.1  DIS3-like exonuclease 2 isoform X1

      Conserved Domains (2) summary
      COG0557
      Location:226 → 812
      VacB; Exoribonuclease R [Transcription]
      pfam17216
      Location:50 → 238
      Rrp44_CSD1; Rrp44-like cold shock domain

    3. XM_043578168.1 → XP_043434103.1  DIS3-like exonuclease 2 isoform X1

      Conserved Domains (2) summary
      COG0557
      Location:226 → 812
      VacB; Exoribonuclease R [Transcription]
      pfam17216
      Location:50 → 238
      Rrp44_CSD1; Rrp44-like cold shock domain

    4. XM_043578170.1 → XP_043434105.1  DIS3-like exonuclease 2 isoform X3

      Conserved Domains (1) summary
      COG0557
      Location:56 → 642
      VacB; Exoribonuclease R [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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