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    LOC1271783 transmembrane protein 47 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1271783, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC1271783
    Gene description
    transmembrane protein 47
    See related
    VectorBase:AGAMI1_013977
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP000456
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1271783 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (7980103..7991984)

    Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC5666753 Neighboring gene uncharacterized LOC133393701 Neighboring gene Protein-L-isoaspartate (D-aspartate) O-methyltransferase Neighboring gene uncharacterized LOC1271780 Neighboring gene acyl-CoA dehydrogenase family member enigma

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protein 47; uncharacterized protein LOC1271783
    Names
    AGAP000456-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      7980103..7991984
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_310637.5 → XP_310637.2  transmembrane protein 47 isoform X3

      See identical proteins and their annotated locations for XP_310637.2

      UniProtKB/TrEMBL
      Q7QFF5
      Conserved Domains (1) summary
      cl21598
      Location:80 → 180
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    2. XM_061659617.1 → XP_061515601.1  uncharacterized protein LOC1271783 isoform X2

    3. XM_061659625.1 → XP_061515609.1  transmembrane protein 47 isoform X3

      UniProtKB/TrEMBL
      Q7QFF5

    4. XM_061659603.1 → XP_061515587.1  transmembrane protein 47 isoform X1

    5. XM_061659609.1 → XP_061515593.1  transmembrane protein 47 isoform X1

    6. XM_061659611.1 → XP_061515595.1  transmembrane protein 47 isoform X1

    7. XM_061659624.1 → XP_061515608.1  transmembrane protein 47 isoform X3

      UniProtKB/TrEMBL
      Q7QFF5
    Nucleotide Protein Strain
    Heading Accession and Version

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