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    LOC1274919 threonylcarbamoyladenosine tRNA methylthiotransferase [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1274919, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC1274919
    Gene description
    threonylcarbamoyladenosine tRNA methylthiotransferase
    See related
    VectorBase:AGAMI1_007643
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP005211
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1274919 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (81249319..81251419, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene SCY1-like protein bma Neighboring gene general odorant-binding protein 72-like Neighboring gene lethal (2) k01209 Neighboring gene eukaryotic translation initiation factor 2B subunit gamma Neighboring gene DENN domain-containing protein 2D Neighboring gene unconventional myosin-XV

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables N6-threonylcarbomyladenosine methylthiotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA methylthiolation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    threonylcarbamoyladenosine tRNA methylthiotransferase
    Names
    AGAP005211-PA
    CDK5 regulatory subunit-associated protein 1-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      81249319..81251419 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_314113.5 → XP_314113.5  threonylcarbamoyladenosine tRNA methylthiotransferase

      UniProtKB/TrEMBL
      Q7PQ33
    Nucleotide Protein Strain
    Heading Accession and Version

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