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    Cort cortistatin [ Mus musculus (house mouse) ]

    Gene ID: 12854, updated on 27-Nov-2024

    Summary

    Official Symbol
    Cortprovided by MGI
    Official Full Name
    cortistatinprovided by MGI
    Primary source
    MGI:MGI:109538
    See related
    Ensembl:ENSMUSG00000028971 AllianceGenome:MGI:109538
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CST; PCST
    Summary
    This gene encodes a member of the somatostatin family of multifunctional peptides attributed with neurohormone, neurotransmitter/modulator and autocrine/paracrine actions. The encoded preproprotein undergoes proteolytic processing to generate a mature functional peptide that can bind to somatostatin receptors. Mice lacking the encoded protein exhibit elevated levels of growth hormone in the plasma without major changes in somatic growth and have exacerbated nociceptive responses to neuropathic and inflammatory pain sensitization. Transgenic mice overexpressing the encoded protein in neurons do not express long-term potentiation in the dentate gyrus and exhibit deficits in synaptic plasticity and learning. [provided by RefSeq, Nov 2015]
    Expression
    Biased expression in frontal lobe adult (RPKM 2.9), cortex adult (RPKM 2.4) and 12 other tissues See more
    Orthologs
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    Genomic context

    See Cort in Genome Data Viewer
    Location:
    4 E2; 4 78.89 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (149209491..149211132, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (149125034..149126763, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 14 Neighboring gene STARR-positive B cell enhancer ABC_E9626 Neighboring gene predicted gene, 46722 Neighboring gene STARR-seq mESC enhancer starr_12102 Neighboring gene DNA fragmentation factor, alpha subunit Neighboring gene STARR-positive B cell enhancer ABC_E4730 Neighboring gene STARR-positive B cell enhancer ABC_E11279 Neighboring gene centromere protein S Neighboring gene ribosomal protein SA, pseudogene 12

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (2)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G protein-coupled receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables G protein-coupled receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables neuropeptide hormone activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables neuropeptide hormone activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables neuropeptide hormone activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001420759.1NP_001407688.1  cortistatin isoform 2 preproprotein

      Status: VALIDATED

      Source sequence(s)
      AL731655
    2. NM_007745.5NP_031771.1  cortistatin isoform 1 preproprotein

      See identical proteins and their annotated locations for NP_031771.1

      Status: VALIDATED

      Source sequence(s)
      AL731655
      Consensus CDS
      CCDS18953.1
      UniProtKB/Swiss-Prot
      A2AH76, P56469, Q9R1P8
      Related
      ENSMUSP00000030815.3, ENSMUST00000030815.3
      Conserved Domains (1) summary
      pfam03002
      Location:91108
      Somatostatin; Somatostatin/Cortistatin family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      149209491..149211132 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)