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    sema3gb sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [ Lampris incognitus (smalleye Pacific opah) ]

    Gene ID: 130108543, updated on 8-May-2024

    Summary

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    Gene symbol
    sema3gb
    Gene description
    sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb
    See related
    EnsemblRapid:ENSLING00000024936
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lampris incognitus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Lampriformes; Lampridae; Lampris
    Orthologs
    zebrafish all
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    Genomic context

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    See sema3gb in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2023_05 current fLamInc1.hap2 (GCF_029633865.1) 2 NC_079212.1 (9582709..9642228)

    Chromosome 2 - NC_079212.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 173 Neighboring gene forkhead box P3b Neighboring gene trafficking protein particle complex subunit 6B Neighboring gene solute carrier family 2, facilitated glucose transporter member 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_079212.1 Chromosome 2 Reference fLamInc1.hap2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemorepellent activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables semaphorin receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of axon extension involved in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neural crest cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in semaphorin-plexin signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029633865.1-RS_2023_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLamInc1.hap2

    Genomic

    1. NC_079212.1 Reference fLamInc1.hap2

      Range
      9582709..9642228
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_056275524.1 → XP_056131499.1  sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb isoform X3

      Related
      ENSLINP00000044873.1, ENSLINT00000048233.2

    2. XM_056275522.1 → XP_056131497.1  sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb isoform X1

    3. XM_056275525.1 → XP_056131500.1  sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb isoform X4

      Related
      ENSLINP00000044869.2, ENSLINT00000048229.2

    4. XM_056275523.1 → XP_056131498.1  sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb isoform X2

    5. XM_056275526.1 → XP_056131501.1  sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb isoform X5

      Related
      ENSLINP00000044861.2, ENSLINT00000048221.2
    Nucleotide Protein
    Heading Accession and Version

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