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    LOC131621115 lysM domain receptor-like kinase 3 [ Vicia villosa (hairy vetch) ]

    Gene ID: 131621115, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC131621115
    Gene description
    lysM domain receptor-like kinase 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vicia villosa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Vicia
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    Genomic context

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    See LOC131621115 in Genome Data Viewer
    Location:
    chromosome: LG7
    Exon count:
    12
    Annotation release Status Assembly LG Location
    RS_2023_08 current Vvil1.0 (GCF_029867415.1) LG7 NC_081186.1 (87457028..87462401)

    Linkage Group LG7 - NC_081186.1Genomic Context describing neighboring genes Neighboring gene putative lipid-transfer protein DIR1 Neighboring gene uncharacterized LOC131621117 Neighboring gene lysM domain receptor-like kinase 3 Neighboring gene UPF0481 protein At3g47200-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_081186.1 Chromosome LG7 Reference Vvil1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane receptor protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysM domain receptor-like kinase 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029867415.1-RS_2023_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Vvil1.0

    Genomic

    1. NC_081186.1 Reference Vvil1.0

      Range
      87457028..87462401
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_058892336.1 → XP_058748319.1  lysM domain receptor-like kinase 3 isoform X4

    2. XM_058892333.1 → XP_058748316.1  lysM domain receptor-like kinase 3 isoform X1

    3. XM_058892335.1 → XP_058748318.1  lysM domain receptor-like kinase 3 isoform X3

    4. XM_058892334.1 → XP_058748317.1  lysM domain receptor-like kinase 3 isoform X2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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