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    NATPE_RS18850 helix-turn-helix domain-containing protein [ Natrinema pellirubrum DSM 15624 ]

    Gene ID: 14336458, updated on 22-Oct-2024

    Summary

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    Gene symbol
    NATPE_RS18850
    Gene description
    helix-turn-helix domain-containing protein
    Locus tag
    NATPE_RS18850
    Gene type
    protein coding
    Organism
    Natrinema pellirubrum DSM 15624 (strain: DSM 15624, nat-host: fish, culture-collection: DSM:15624, type-material: type strain of Natrinema pellirubrum)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Halobacteria; Halobacteriales; Natrialbaceae; Natrinema
    Old locus tag
    Natpe_3992
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    Genomic context

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    Location:
    plasmid: pNATPE01
    Sequence:
    NC_019967.1 (93964..94914, complement)

    NC_019967.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_019967.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    helix-turn-helix domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_019967.1 Reference assembly

      Range
      93964..94914 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_015310258.1 MULTISPECIES: helix-turn-helix domain-containing protein [Halobacteriales]

      See identical proteins and their annotated locations for WP_015310258.1

      UniProtKB/TrEMBL
      A0A1H3K075, L0JSD0
      Conserved Domains (2) summary
      COG1846
      Location:2 → 62
      MarR; DNA-binding transcriptional regulator, MarR family [Transcription]
      pfam12802
      Location:87 → 135
      MarR_2; MarR family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases