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    lncRNA:CR43753 long non-coding RNA:CR43753 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 14462671, updated on 9-Dec-2024

    Summary

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    Official Symbol
    lncRNA:CR43753provided by FlyBase
    Official Full Name
    long non-coding RNA:CR43753provided by FlyBase
    Primary source
    FLYBASE:FBgn0264084
    Locus tag
    Dmel_CR43753
    See related
    AllianceGenome:FB:FBgn0264084
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR43753; Dmel\CR43753; lincRNA.13
    Summary
    Involved in spermatogenesis. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See lncRNA:CR43753 in Genome Data Viewer
    Location:
    22D6-22D6; 2-5 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (2271319..2279714, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (2271319..2279714, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43754 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Critical roles of long noncoding RNAs in Drosophila spermatogenesis. Wen K, et al. Genome Res, 2016 Sep. PMID 27516619, Free PMC Article
    2. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    4. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR43753-RA; Dmel\lncRNA:CR43753-RA; CR43753-RA; Dmel\CR43753-RA
    • lncRNA:CR43753-RB; Dmel\lncRNA:CR43753-RB; CR43753-RB; Dmel\CR43753-RB
    • lncRNA:CR43753-RC; Dmel\lncRNA:CR43753-RC; CR43753-RC; Dmel\CR43753-RC

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in spermatogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      2271319..2279714 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_073698.1 RNA Sequence

      Status: REVIEWED

    2. NR_073699.1 RNA Sequence

      Status: REVIEWED

    3. NR_073700.1 RNA Sequence

      Status: REVIEWED

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.