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    PTSG_02316 forkhead box J3 [ Salpingoeca rosetta ]

    Gene ID: 16077398, updated on 14-Dec-2023

    Summary

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    Gene symbol
    PTSG_02316
    Gene description
    forkhead box J3
    Locus tag
    PTSG_02316
    Gene type
    protein coding
    RNA name
    forkhead box J3
    RefSeq status
    PROVISIONAL
    Organism
    Salpingoeca rosetta (strain: ATCC 50818, culture-collection: ATCC:50818)
    Lineage
    Eukaryota; Choanoflagellida; Craspedida; Salpingoecidae; Salpingoeca
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    Genomic context

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    See PTSG_02316 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_004754929.1Genomic Context describing neighboring genes Neighboring gene leucyl-tRNA synthetase Neighboring gene transcriptional coactivator/pterin dehydratase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004754929.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box J3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_004754929.1 Reference assembly

      Range
      1165944..1169281 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004996748.1 → XP_004996805.1  forkhead box J3 [Salpingoeca rosetta]

      See identical proteins and their annotated locations for XP_004996805.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      F2U1U9
      Conserved Domains (1) summary
      pfam00250
      Location:485 → 570
      Forkhead; Forkhead domain
    Protein Accession Links
    GenPept Link UniProtKB Link
    EGD81601.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases