F33A8.4 CTCHY-type domain-containing protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: F33A8.4
Official Full Name: CTCHY-type domain-containing protein
Primary source: WormBase:WBGene00009352
Locus tag: CELE_F33A8.4
See related: AllianceGenome:WB:WBGene00009352
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable rRNA (adenine-N6-)-methyltransferase activity. Predicted to be involved in rRNA methylation. Predicted to be located in nucleus. Predicted to be active in cytoplasm and nucleolus. Orthologous to human ZCCHC4 (zinc finger CCHC-type containing 4). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See F33A8.4 in Genome Data Viewer

Location:: chromosome: II

Exon count:: 7

Sequence:: Chromosome: II; NC_003280.10 (11045786..11049030, complement)

Chromosome II - NC_003280.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

F33A8.5 (e-PCR)
- UniSTS:320533

F33A8.4 (e-PCR)
- UniSTS:314201

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables methyltransferase activity	IEA Inferred from Electronic Annotation more info
enables rRNA (adenine-N6-)-methyltransferase activity	IBA Inferred from Biological aspect of Ancestor more info
enables rRNA (adenine-N6-)-methyltransferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in methylation	IEA Inferred from Electronic Annotation more info
involved_in rRNA methylation	IBA Inferred from Biological aspect of Ancestor more info
involved_in rRNA methylation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
is_active_in nucleolus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: CTCHY-type domain-containing protein

NP_496368.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003280.10 Reference assembly

Range

11045786..11049030 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_063967.5 → NP_496368.1 CTCHY-type domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_496368.1

Status: REVIEWED

UniProtKB/TrEMBL

O62214

Conserved Domains (2) summary

pfam10237
Location:210 → 361

N6-adenineMlase; Probable N6-adenine methyltransferase

pfam12675
Location:404 → 452

DUF3795; Protein of unknown function (DUF3795)