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    T06D8.10 Peroxidase [ Caenorhabditis elegans ]

    Gene ID: 174717, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T06D8.10
    Official Full Name
    Peroxidase
    Primary source
    WormBase:WBGene00011530
    Locus tag
    CELE_T06D8.10
    See related
    AllianceGenome:WB:WBGene00011530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable peroxidase activity. Predicted to be involved in cellular oxidant detoxification and response to oxidative stress. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T06D8.10 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    12
    Sequence:
    Chromosome: II; NC_003280.10 (11240932..11247514, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene FUN14 domain-containing protein fndc-1 Neighboring gene ncRNA Neighboring gene 26S proteasome non-ATPase regulatory subunit 13 Neighboring gene Store-operated calcium entry-associated regulatory factor Neighboring gene ncRNA Neighboring gene Apple domain-containing protein Neighboring gene Nuclear receptor domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways. Duchaine TF, et al. Cell, 2006 Jan 27. PMID 16439208
    2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables peroxidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellular oxidant detoxification IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Peroxidase
    NP_496407.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      11240932..11247514 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064006.8 → NP_496407.1  Peroxidase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496407.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5ECK5
      Conserved Domains (2) summary
      cd09823
      Location:998 → 1381
      peroxinectin_like; peroxinectin_like animal heme peroxidases
      pfam03098
      Location:847 → 1382
      An_peroxidase; Animal haem peroxidase
    Nucleotide Protein
    Heading Accession and Version

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