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    D2023.1 Cytochrome b5 heme-binding domain-containing protein;Serpentine Receptor, class T [ Caenorhabditis elegans ]

    Gene ID: 179615, updated on 9-Dec-2024

    Summary

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    Official Symbol
    D2023.1
    Official Full Name
    Cytochrome b5 heme-binding domain-containing protein;Serpentine Receptor, class T
    Primary source
    WormBase:WBGene00014300
    Locus tag
    CELE_D2023.1
    See related
    AllianceGenome:WB:WBGene00014300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable heme binding activity and metal ion binding activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See D2023.1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    13
    Sequence:
    Chromosome: V; NC_003283.11 (11789550..11800544)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Phosphoglycerate mutase family protein Neighboring gene RING-CH-type domain-containing protein Neighboring gene Reverse transcriptase domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene C2 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Cytochrome b5 heme-binding domain-containing protein;Serpentine Receptor, class T
    NP_001256371.1
    • Confirmed by transcript evidence
    NP_001256372.1
    • Confirmed by transcript evidence
    NP_001364652.1
    • Confirmed by transcript evidence
    NP_001367225.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      11789550..11800544
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269442.2 → NP_001256371.1  Serpentine Receptor, class T [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256371.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EGM5
      Conserved Domains (1) summary
      pfam03125
      Location:91 → 209
      Sre; C. elegans Sre G protein-coupled chemoreceptor

    2. NM_001269443.4 → NP_001256372.1  Serpentine Receptor, class T [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256372.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EBI9
      Conserved Domains (1) summary
      pfam03125
      Location:96 → 214
      Sre; C. elegans Sre G protein-coupled chemoreceptor

    3. NM_001380774.1 → NP_001367225.1  Cytochrome b5 heme-binding domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      D1MN82

    4. NM_001377606.2 → NP_001364652.1  Cytochrome b5 heme-binding domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q2L6U6
      Conserved Domains (1) summary
      pfam00173
      Location:7 → 78
      Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain

    RNA

    1. NR_003168.3 RNA Sequence

      Status: REVIEWED

    2. NR_003167.3 RNA Sequence

      Status: REVIEWED

    3. NR_003166.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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