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    LOC18025110 long-chain-alcohol oxidase FAO3 [ Eutrema salsugineum ]

    Gene ID: 18025110, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC18025110
    Gene description
    long-chain-alcohol oxidase FAO3
    Locus tag
    EUTSA_v10020141mg
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Eutrema salsugineum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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    Genomic context

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    See LOC18025110 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256885.1 (298483..302738, complement)

    NW_006256885.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18025307 Neighboring gene phosphate transporter PHO1 Neighboring gene plastid-lipid-associated protein 6, chloroplastic Neighboring gene 60S ribosomal protein L36a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006256885 Unplaced Scaffold Reference Eutsalg1_0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables long-chain-alcohol oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    long-chain-alcohol oxidase FAO3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Eutsalg1_0

    Genomic

    1. NW_006256885.1 Reference Eutsalg1_0

      Range
      298483..302738 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006405965.2 → XP_006406028.1  long-chain-alcohol oxidase FAO3

      See identical proteins and their annotated locations for XP_006406028.1

      UniProtKB/TrEMBL
      V4NM59
      Conserved Domains (3) summary
      COG2303
      Location:250 → 738
      BetA; Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]
      pfam00732
      Location:279 → 502
      GMC_oxred_N; GMC oxidoreductase
      pfam05199
      Location:598 → 732
      GMC_oxred_C; GMC oxidoreductase
    Nucleotide Protein
    Heading Accession and Version

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