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    LOC18031121 mitogen-activated protein kinase kinase 2 [ Eutrema salsugineum ]

    Gene ID: 18031121, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC18031121
    Gene description
    mitogen-activated protein kinase kinase 2
    Locus tag
    EUTSA_v10025531mg
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Eutrema salsugineum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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    Genomic context

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    See LOC18031121 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256909.1 (4439097..4441419)

    NW_006256909.1Genomic Context describing neighboring genes Neighboring gene WD repeat-containing protein VIP3 Neighboring gene pre-mRNA cleavage factor Im 25 kDa subunit 1 Neighboring gene patatin-like protein 8 Neighboring gene uncharacterized LOC18031123

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006256909 Unplaced Scaffold Reference Eutsalg1_0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitogen-activated protein kinase kinase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Eutsalg1_0

    Genomic

    1. NW_006256909.1 Reference Eutsalg1_0

      Range
      4439097..4441419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006412741.2 → XP_006412804.1  mitogen-activated protein kinase kinase 2

      See identical proteins and their annotated locations for XP_006412804.1

      UniProtKB/TrEMBL
      V4MG45, V4MN26
      Conserved Domains (2) summary
      cd06623
      Location:68 → 335
      PKc_MAPKK_plant_like; Catalytic domain of Plant dual-specificity Mitogen-Activated Protein Kinase Kinases and similar proteins
      smart00220
      Location:71 → 330
      S_TKc; Serine/Threonine protein kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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