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    scd-1 Suppressor of Constitutive Dauer formation [ Caenorhabditis elegans ]

    Gene ID: 181408, updated on 9-Dec-2024

    Summary

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    Official Symbol
    scd-1
    Official Full Name
    Suppressor of Constitutive Dauer formation
    Primary source
    WormBase:WBGene00004739
    Locus tag
    CELE_H20J18.1
    See related
    AllianceGenome:WB:WBGene00004739
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in body wall musculature; intestine; nervous system; and reproductive system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See scd-1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    14
    Sequence:
    Chromosome: X; NC_003284.9 (12503887..12525789, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Lipase Neighboring gene SKN-1 Dependent Zygotic transcript Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Suppressors of transforming growth factor-beta pathway mutants in the Caenorhabditis elegans dauer formation pathway. Inoue T, et al. Genetics, 2000 Nov. PMID 11063683, Free PMC Article
    2. Targets of TGF beta-related signaling in Caenorhabditis elegans. Savage-Dunn C. Cytokine Growth Factor Rev, 2001 Dec. PMID 11544101
    3. C. elegans longevity pathways converge to decrease mitochondrial membrane potential. Lemire BD, et al. Mech Ageing Dev, 2009 Jul. PMID 19442682
    4. Coordinate regulation of lipid metabolism by novel nuclear receptor partnerships. Pathare PP, et al. PLoS Genet, 2012. PMID 22511885, Free PMC Article
    5. Ubiquitin-mediated pathways in C. elegans. Kipreos ET. WormBook, 2005 Dec 1. PMID 18050424, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Suppressor of Constitutive Dauer formation
    NP_001360646.1
    • Confirmed by transcript evidence
    NP_001360782.1
    • Confirmed by transcript evidence
    NP_001360784.1
    • Confirmed by transcript evidence
    NP_001367017.1
    • Partially confirmed by transcript evidence
    NP_001368761.1
    • Confirmed by transcript evidence
    NP_001368762.1
    • Confirmed by transcript evidence
    NP_001368763.1
    • Confirmed by transcript evidence
    NP_741912.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      12503887..12525789 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001373534.4 → NP_001360782.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IL24

    2. NM_001381120.2 → NP_001368763.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0INV4

    3. NM_001373535.3 → NP_001360784.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0INN2

    4. NM_001381123.3 → NP_001368762.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IKH6

    5. NM_171974.8 → NP_741912.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741912.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XXK5

    6. NM_001381122.2 → NP_001367017.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MQ12

    7. NM_001381121.2 → NP_001368761.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IKL1

    8. NM_001373531.3 → NP_001360646.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IN69
    Nucleotide Protein
    Heading Accession and Version

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