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    H18N23.2 Protein phosphatase 1 regulatory subunit [ Caenorhabditis elegans ]

    Gene ID: 181788, updated on 9-Dec-2024

    Summary

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    Official Symbol
    H18N23.2
    Official Full Name
    Protein phosphatase 1 regulatory subunit
    Primary source
    WormBase:WBGene00019211
    Locus tag
    CELE_H18N23.2
    See related
    AllianceGenome:WB:WBGene00019211
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable glycogen binding activity and protein phosphatase 1 binding activity. Predicted to be involved in regulation of glycogen biosynthetic process. Predicted to be part of protein phosphatase type 1 complex. Orthologous to several human genes including PPP1R3B (protein phosphatase 1 regulatory subunit 3B). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See H18N23.2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Sequence:
    Chromosome: X; NC_003284.9 (17622710..17640871, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene tRNA-Val Neighboring gene ncRNA Neighboring gene EF-hand domain-containing protein Neighboring gene ncRNA Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables glycogen binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables protein phosphatase 1 binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in glycogen metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of glycogen biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of protein phosphatase type 1 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Protein phosphatase 1 regulatory subunit
    NP_001359868.1
    • Confirmed by transcript evidence
    NP_001359869.1
    • Confirmed by transcript evidence
    NP_741955.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      17622710..17640871 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001373635.2 → NP_001359868.1  Protein phosphatase 1 regulatory subunit [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EE64
      Conserved Domains (1) summary
      pfam03370
      Location:185 → 290
      CBM_21; Carbohydrate/starch-binding module (family 21)

    2. NM_001373634.3 → NP_001359869.1  Protein phosphatase 1 regulatory subunit [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q400N3
      Conserved Domains (1) summary
      pfam03370
      Location:195 → 300
      CBM_21; Carbohydrate/starch-binding module (family 21)

    3. NM_171822.6 → NP_741955.2  Protein phosphatase 1 regulatory subunit [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741955.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KYT5
      Conserved Domains (1) summary
      pfam03370
      Location:209 → 314
      CBM_21; Carbohydrate/starch-binding module (family 21)
    Nucleotide Protein
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