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    Prl2c2 prolactin family 2, subfamily c, member 2 [ Mus musculus (house mouse) ]

    Gene ID: 18811, updated on 27-Nov-2024

    Summary

    Official Symbol
    Prl2c2provided by MGI
    Official Full Name
    prolactin family 2, subfamily c, member 2provided by MGI
    Primary source
    MGI:MGI:97618
    See related
    Ensembl:ENSMUSG00000079092 AllianceGenome:MGI:97618
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Plf; Ghd2; Plf1; MRP-1; PLF-1
    Summary
    Enables growth factor activity and hormone activity. Acts upstream of or within several processes, including positive regulation of blood vessel endothelial cell migration; positive regulation of neuroblast proliferation; and regulation of cell projection organization. Located in endoplasmic reticulum and extracellular space. Is expressed in extraembryonic component and placenta. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward placenta adult (RPKM 2175.4) See more
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    Genomic context

    See Prl2c2 in Genome Data Viewer
    Location:
    13 A1; 13 5.18 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (13170705..13179978, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (12996120..13005393, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr13:12980350-12980651 Neighboring gene lysophosphatidylcholine acyltransferase 4 pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr13:12993762-12994063 Neighboring gene STARR-seq mESC enhancer starr_33673 Neighboring gene STARR-positive B cell enhancer mm9_chr13:13027404-13027704 Neighboring gene predicted gene, 53801 Neighboring gene STARR-seq mESC enhancer starr_33674 Neighboring gene predicted gene, 40903 Neighboring gene R3H domain containing 2 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables growth factor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables hormone activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables hormone activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables prolactin receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of blood vessel endothelial cell migration IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of cell projection organization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cell surface receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in female pregnancy IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mammary gland development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of myoblast differentiation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of myoblast differentiation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of neuroblast proliferation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of angiogenesis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of blood vessel endothelial cell migration IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of cell projection organization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of lactation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within positive regulation of neuroblast proliferation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of receptor signaling pathway via JAK-STAT IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within regulation of microvillus assembly IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in response to nutrient levels IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within sprouting angiogenesis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    prolactin-2C2
    Names
    growth hormone d2
    mitogen-regulated protein 1
    proliferin
    proliferin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_031191.2NP_112468.1  prolactin-2C2 precursor

      See identical proteins and their annotated locations for NP_112468.1

      Status: VALIDATED

      Source sequence(s)
      BC080826, CT033774
      Consensus CDS
      CCDS36596.1
      UniProtKB/Swiss-Prot
      B7ZNU8, P04095, Q498A4, Q61899
      UniProtKB/TrEMBL
      A0A0M6L0W4, Q6P215, Q7TND2
      Related
      ENSMUSP00000106224.3, ENSMUST00000110594.4
      Conserved Domains (1) summary
      pfam00103
      Location:33224
      Hormone_1; Somatotropin hormone family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      13170705..13179978 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006516577.2XP_006516640.1  prolactin-2C2 isoform X2

      Conserved Domains (1) summary
      cl07831
      Location:13167
      growth_hormone_like; Somatotropin/prolactin hormone family
    2. XM_017315421.2XP_017170910.1  prolactin-2C2 isoform X1

      UniProtKB/TrEMBL
      Q6P215, Q7TND2
      Conserved Domains (1) summary
      pfam00103
      Location:22222
      Hormone_1; Somatotropin hormone family