U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    SJAG_05373 Rad32 nuclease [ Schizosaccharomyces japonicus yFS275 ]

    Gene ID: 22831072, updated on 17-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    SJAG_05373
    Gene description
    Rad32 nuclease
    Locus tag
    SJAG_05373
    See related
    FungiDB:SJAG_05373; VEuPathDB:SJAG_05373
    Gene type
    protein coding
    RNA name
    Rad32 nuclease
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces japonicus yFS275 (strain: yFS275)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SJAG_05373 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    6

    NW_011627860.1Genomic Context describing neighboring genes Neighboring gene nucleoporin Nic96 Neighboring gene GTPase activating protein Neighboring gene fungal protein Neighboring gene Ku domain-containing protein Pku70 Neighboring gene tRNA pseudouridine synthase Lsp1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_011627860.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Comparative functional genomics of the fission yeasts. Rhind N, et al. Science, 2011 May 20. PMID 21511999, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by JaponicusDB

    Function Evidence Code Pubs
    enables DNA end binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables Y-form DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables double-stranded DNA 3'-5' DNA exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables manganese ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables single-stranded DNA 3'-5' DNA exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables single-stranded DNA endodeoxyribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA double-strand break processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in double-strand break repair IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in double-strand break repair involved in meiotic recombination IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in double-strand break repair via nonhomologous end joining IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in meiotic DNA double-strand break formation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in mitochondrial double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in mitotic G2 DNA damage checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in mitotic intra-S DNA damage checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in reciprocal meiotic recombination IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in telomere maintenance IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of Mre11 complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in chromosome, telomeric repeat region IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in site of double-strand break IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Names
    Rad32 nuclease

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_011627860.1 Reference assembly

      Range
      4082939..4085411 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011050664.1 → XP_011048966.1  Rad32 nuclease [Schizosaccharomyces japonicus yFS275]

      See identical proteins and their annotated locations for XP_011048966.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      T0RT79
      Conserved Domains (3) summary
      TIGR00583
      Location:20 → 418
      mre11; DNA repair protein (mre11)
      cd00840
      Location:24 → 285
      MPP_Mre11_N; Mre11 nuclease, N-terminal metallophosphatase domain
      pfam04152
      Location:305 → 472
      Mre11_DNA_bind; Mre11 DNA-binding presumed domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials