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    DACI_RS19855 type II toxin-antitoxin system Phd/YefM family antitoxin [ Delftia acidovorans SPH-1 ]

    Gene ID: 24115746, updated on 21-Nov-2024

    Summary

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    Gene symbol
    DACI_RS19855
    Gene description
    type II toxin-antitoxin system Phd/YefM family antitoxin
    Locus tag
    DACI_RS19855
    Gene type
    protein coding
    Organism
    Delftia acidovorans SPH-1 (strain: SPH-1)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
    Old locus tag
    Daci_3961
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    Genomic context

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    Sequence:
    NC_010002.1 (4362787..4363047)

    NC_010002.1Genomic Context describing neighboring genes Neighboring gene response regulator Neighboring gene cell wall metabolism sensor histidine kinase WalK Neighboring gene type II toxin-antitoxin system VapC family toxin Neighboring gene 3-deoxy-D-manno-octulosonic acid transferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_010002.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Toxin-Antitoxin Systems in Pathogenic Bacteria. Alonso JC. Toxins (Basel), 2021 Jan 20. PMID 33498357, Free PMC Article
    2. Type II Toxin-Antitoxin Systems: Evolution and Revolutions. Fraikin N, et al. J Bacteriol, 2020 Mar 11. PMID 31932311, Free PMC Article
    3. Mineralization of individual congeners of linear alkylbenzenesulfonate by defined pairs of heterotrophic bacteria. Schleheck D, et al. Appl Environ Microbiol, 2004 Jul. PMID 15240283, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    type II toxin-antitoxin system Phd/YefM family antitoxin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010002.1 Reference assembly

      Range
      4362787..4363047
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012205786.1 MULTISPECIES: type II toxin-antitoxin system Phd/YefM family antitoxin [Delftia]

      See identical proteins and their annotated locations for WP_012205786.1

      UniProtKB/TrEMBL
      A9BWR5
      Conserved Domains (1) summary
      pfam02604
      Location:1 → 68
      PhdYeFM_antitox; Antitoxin Phd_YefM, type II toxin-antitoxin system
    Nucleotide Protein
    Heading Accession and Version