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    SCAB_RS17540 poly(A) polymerase [ Streptomyces scabiei 87.22 ]

    Gene ID: 24306846, updated on 13-Dec-2024

    Summary

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    Gene symbol
    SCAB_RS17540
    Gene description
    poly(A) polymerase
    Locus tag
    SCAB_RS17540
    Gene type
    protein coding
    Organism
    Streptomyces scabiei 87.22 (strain: 87.22)
    Lineage
    Bacteria; Bacillati; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces
    Old locus tag
    SCAB_36991
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    Genomic context

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    Sequence:
    NC_013929.1 (4163309..4166086)

    NC_013929.1Genomic Context describing neighboring genes Neighboring gene YoaK family protein Neighboring gene RNA ligase family protein Neighboring gene hypothetical protein Neighboring gene DNA-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013929.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structure of mammalian poly(A) polymerase in complex with an analog of ATP. Martin G, et al. EMBO J, 2000 Aug 15. PMID 10944102, Free PMC Article
    2. Streptomyces scabies 87-22 contains a coronafacic acid-like biosynthetic cluster that contributes to plant-microbe interactions. Bignell DR, et al. Mol Plant Microbe Interact, 2010 Feb. PMID 20064060

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    poly(A) polymerase
    WP_013001421.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013929.1 Reference assembly

      Range
      4163309..4166086
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_013001421.1 MULTISPECIES: poly(A) polymerase [Streptomyces]

      See identical proteins and their annotated locations for WP_013001421.1

      UniProtKB/TrEMBL
      C9YW83
      Conserved Domains (4) summary
      cd09080
      Location:123 → 364
      TDP2; Phosphodiesterase domain of human TDP2, a 5'-tyrosyl DNA phosphodiesterase, and related domains
      PTZ00418
      Location:585 → 862
      PTZ00418; Poly(A) polymerase; Provisional
      pfam04457
      Location:1 → 65
      DUF504; Protein of unknown function (DUF504)
      pfam13563
      Location:391 → 537
      2_5_RNA_ligase2; 2'-5' RNA ligase superfamily
    Nucleotide Protein
    Heading Accession and Version

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