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    IFT20 Intraflagellar transport 20 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 246616, updated on 9-Dec-2024

    Summary

    Official Symbol
    IFT20provided by FlyBase
    Official Full Name
    Intraflagellar transport 20provided by FlyBase
    Primary source
    FLYBASE:FBgn0050441
    Locus tag
    Dmel_CG30441
    See related
    AllianceGenome:FB:FBgn0050441
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG30441; Dmel\CG30441
    Summary
    Predicted to be involved in cilium assembly and protein localization to cilium. Predicted to be located in cilium. Predicted to be part of intraciliary transport particle B. Predicted to be active in several cellular components, including ciliary base; microtubule organizing center; and non-motile cilium. Orthologous to human IFT20 (intraflagellar transport 20). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See IFT20 in Genome Data Viewer
    Location:
    41E5-41E5; 2-55 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (5351717..5352122, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (1239222..1239627, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene super sex combs Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Cytochrome c oxidase subunit 4-like Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    General gene information

    • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in cilium assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cilium assembly ISM
    Inferred from Sequence Model
    more info
    PubMed 
    involved_in protein localization to cilium IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in centrosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in ciliary basal body IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in ciliary base IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cilium ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of intraciliary transport particle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of intraciliary transport particle B ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in non-motile cilium IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    intraflagellar transport 20
    Names
    CG30441-PB
    IFT20-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      5351717..5352122 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_165429.3NP_724409.3  intraflagellar transport 20 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724409.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z6F0, Q4QQ03
      Conserved Domains (1) summary
      pfam14931
      Location:8126
      IFT20; Intraflagellar transport complex B, subunit 20