U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    tef103 translation elongation factor EF-1 alpha Ef1a-c [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539917, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    tef103
    Official Full Name
    translation elongation factor EF-1 alpha Ef1a-c
    Primary source
    PomBase:SPBC839.15c
    Locus tag
    SPOM_SPBC839.15C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    EF-1aC; ef1a-c; efa13
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See tef103 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (626004..627522, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene methyltransferase Efm4 Neighboring gene C1-5,6,7,8-tetrahydrofolate (THF) synthase, trifunctional enzyme Thf1 Neighboring gene FKBP-type peptidyl-prolyl cis-trans isomerase Fkh1 Neighboring gene gfo/idh/mocA family oxidoreductase Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Cloning of a Schizosaccharomyces pombe homologue of elongation factor 1 alpha by two-hybrid selection of calmodulin-binding proteins. Rasmussen C, et al. Biochem Cell Biol, 1999. PMID 10593605
    2. PRMT3 is a ribosomal protein methyltransferase that affects the cellular levels of ribosomal subunits. Bachand F, et al. EMBO J, 2004 Jul 7. PMID 15175657, Free PMC Article
    3. Peptide elongation factor 1 from yeasts: purification and biochemical characterization of peptide elongation factors 1 alpha and 1 beta (gamma) from Saccharomyces carlsbergensis and Schizosaccharomyces pombe. Miyazaki M, et al. J Biochem, 1988 Mar. PMID 3214489
    4. The S. pombe translation initiation factor eIF4G is Sumoylated and associates with the SUMO protease Ulp2. Jongjitwimol J, et al. PLoS One, 2014. PMID 24818994, Free PMC Article
    5. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables calmodulin binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables translation elongation factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translational elongation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in translational elongation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of eukaryotic translation elongation factor 1 complex ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    translation elongation factor EF-1 alpha Ef1a-c

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      626004..627522 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021161.3 → NP_595255.1  translation elongation factor EF-1 alpha Ef1a-c [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595255.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P0CT54, P0CT55
      Conserved Domains (4) summary
      PTZ00141
      Location:1 → 448
      PTZ00141; elongation factor 1- alpha; Provisional
      cd01883
      Location:9 → 236
      EF1_alpha; Elongation Factor 1-alpha (EF1-alpha) protein family
      cd03693
      Location:240 → 330
      EF1_alpha_II; Domain II of elongation factor 1-alpha
      cd03705
      Location:333 → 436
      EF1_alpha_III; Domain III of Elongation Factor 1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous