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    rna14 cleavage and polyadenylation specificity factor complex subunit Rna14 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541600, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rna14
    Official Full Name
    cleavage and polyadenylation specificity factor complex subunit Rna14
    Primary source
    PomBase:SPAC6F12.17
    Locus tag
    SPOM_SPAC6F12.17
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See rna14 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003424.3 (1348764..1351231)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene anaphase-promoting complex TPR lobe subcomplex subunit Apc8 Neighboring gene ncRNA Neighboring gene anaphase-promoting complex TPR lobe subcomplex subunit Cut9/Apc6 Neighboring gene TRAMP complex ATP-dependent RNA helicase subunit Mtr4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene nucleoporin Nup40 Neighboring gene ncRNA Neighboring gene NIMA-like serine/threonine protein kinase Fin1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fission yeast Ctf1, a cleavage and polyadenylation factor subunit is required for the maintenance of genomic integrity. Sonkar A, et al. Mol Genet Genomics, 2017 Oct. PMID 28567704
    2. Mutant allele of rna14 in fission yeast affects pre-mRNA splicing. Yadav S, et al. J Genet, 2016 Jun. PMID 27350684
    3. Cleavage and polyadenylation factor, Rna14 is an essential protein required for the maintenance of genomic integrity in fission yeast Schizosaccharomyces pombe. Sonkar A, et al. Biochim Biophys Acta, 2016 Feb. PMID 26581324
    4. Condensin locates at transcriptional termination sites in mitosis, possibly releasing mitotic transcripts. Nakazawa N, et al. Open Biol, 2019 Oct 31. PMID 31615333, Free PMC Article
    5. The conserved protein Seb1 drives transcription termination by binding RNA polymerase II and nascent RNA. Wittmann S, et al. Nat Commun, 2017 Apr 3. PMID 28367989, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in RNA 3'-end processing IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in chromatin IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of mRNA cleavage stimulating factor complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in nucleus HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cleavage and polyadenylation specificity factor complex subunit Rna14

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      1348764..1351231
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018733.3 → NP_593303.1  cleavage and polyadenylation specificity factor complex subunit Rna14 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593303.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O14233
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials