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    gaa1 GPI-anchor transamidase complex subunit Gaa1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543268, updated on 14-Nov-2024

    Summary

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    Official Symbol
    gaa1
    Official Full Name
    GPI-anchor transamidase complex subunit Gaa1
    Primary source
    PomBase:SPAC1002.11
    Locus tag
    SPOM_SPAC1002.11
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See gaa1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (1816499..1818558)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene dihydrolipoamide dehydrogenase Dld1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene snRNP binding protein Sgt1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene putative succinate-semialdehyde dehydrogenase Neighboring gene ncRNA Neighboring gene beta-glucosidase Psu1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Biosynthesis of GPI-anchored proteins: special emphasis on GPI lipid remodeling. Kinoshita T, et al. J Lipid Res, 2016 Jan. PMID 26563290, Free PMC Article
    2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    3. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    contributes_to GPI-anchor transamidase activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in attachment of GPI anchor to protein IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of GPI-anchor transamidase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in endoplasmic reticulum HDA PubMed 

    General protein information

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    Preferred Names
    GPI-anchor transamidase complex subunit Gaa1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      1816499..1818558
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018932.3 → NP_593498.1  GPI-anchor transamidase complex subunit Gaa1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593498.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9US48
      Conserved Domains (1) summary
      pfam04114
      Location:123 → 552
      Gaa1; Gaa1-like, GPI transamidase component
    Nucleotide Protein
    Heading Accession and Version

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