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    pmc1 P2 type calcium transporting P-type ATPase Pmc1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543477, updated on 18-Sep-2024

    Summary

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    Official Symbol
    pmc1
    Official Full Name
    P2 type calcium transporting P-type ATPase Pmc1
    Primary source
    PomBase:SPAPB2B4.04c
    Locus tag
    SPOM_SPAPB2B4.04C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See pmc1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (2712704..2718022, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene mitochondrial [2Fe-2S] cluster assembly and transfer glutaredoxin Grx5 Neighboring gene ncRNA Neighboring gene G1/S-specific B-type cyclin Cig2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Schizosaccharomyces pombe Pmr1p is essential for cell wall integrity and is required for polarized cell growth and cytokinesis. Cortés JC, et al. Eukaryot Cell, 2004 Oct. PMID 15470240, Free PMC Article
    2. Real-time monitoring of calcineurin activity in living cells: evidence for two distinct Ca2+-dependent pathways in fission yeast. Deng L, et al. Mol Biol Cell, 2006 Nov. PMID 16928959, Free PMC Article
    3. Global coordination of transcriptional control and mRNA decay during cellular differentiation. Amorim MJ, et al. Mol Syst Biol, 2010 Jun 8. PMID 20531409, Free PMC Article
    4. The fission yeast FLCN/FNIP complex augments TORC1 repression or activation in response to amino acid (AA) availability. Calvo IA, et al. iScience, 2021 Nov 19. PMID 34805795, Free PMC Article
    5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP binding IC
    Inferred by Curator
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables P-type calcium transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables calcium ion binding ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in intracellular calcium ion homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in intracellular calcium ion homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in fungal-type vacuole membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    P2 type calcium transporting P-type ATPase Pmc1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      2712704..2718022 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019320.3 → NP_593890.1  P2 type calcium transporting P-type ATPase Pmc1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593890.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9HDW7, Q9UTX0
      Conserved Domains (6) summary
      COG4087
      Location:838 → 916
      COG4087; Soluble P-type ATPase [General function prediction only]
      TIGR01517
      Location:97 → 1140
      ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
      pfam00122
      Location:316 → 534
      E1-E2_ATPase; E1-E2 ATPase
      pfam00689
      Location:966 → 1137
      Cation_ATPase_C; Cation transporting ATPase, C-terminus
      pfam00690
      Location:206 → 248
      Cation_ATPase_N; Cation transporter/ATPase, N-terminus
      pfam13246
      Location:624 → 704
      Cation_ATPase; Cation transport ATPase (P-type)
    Nucleotide Protein
    Heading Accession and Version

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