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    PSV08DRAFT_413063 uncharacterized protein [ Bipolaris maydis (southern corn leaf blight pathogen) ]

    Gene ID: 25840443, updated on 10-Jul-2024

    Summary

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    Gene symbol
    PSV08DRAFT_413063
    Gene description
    uncharacterized protein
    Locus tag
    PSV08DRAFT_413063
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bipolaris maydis (strain: C4)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Bipolaris
    Old locus tag
    COCC4DRAFT_175694
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    Genomic context

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    See PSV08DRAFT_413063 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    6

    NW_027093874.1Genomic Context describing neighboring genes Neighboring gene clasp N terminal-domain-containing protein Neighboring gene Thi4 family-domain-containing protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_027093874.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_027093874.1 Reference assembly

      Range
      274100..278540
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014220392.1 → XP_014075867.1  uncharacterized protein PSV08DRAFT_413063 [Bipolaris maydis]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      M2SKW7, N4X0D6
      Conserved Domains (5) summary
      cd09394
      Location:20 → 74
      LIM1_Rga; The first LIM domain of Rga GTPase-Activating Proteins
      cd09395
      Location:77 → 128
      LIM2_Rga; The second LIM domain of Rga GTPase-Activating Proteins
      smart00324
      Location:1007 → 1179
      RhoGAP; GTPase-activator protein for Rho-like GTPases
      PHA03307
      Location:142 → 549
      PHA03307; transcriptional regulator ICP4; Provisional
      COG1196
      Location:653 → 817
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

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