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    SPP1 secreted phosphoprotein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 281499, updated on 27-Dec-2024

    Summary

    Official Symbol
    SPP1provided by VGNC
    Official Full Name
    secreted phosphoprotein 1provided by VGNC
    Primary source
    VGNC:VGNC:35232
    See related
    BGD:BT11993; Ensembl:ENSBTAG00000005260
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    OPN; OST
    Orthologs
    NEW
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    Genomic context

    See SPP1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 6 NC_037333.1 (36693204..36700208, complement)

    Chromosome 6 - NC_037333.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily G member 2 Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene polycystin 2, transient receptor potential cation channel Neighboring gene uncharacterized LOC112447053 Neighboring gene uncharacterized LOC132345488 Neighboring gene matrix extracellular phosphoglycoprotein

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037333.1 Chromosome 6 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables extracellular matrix binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in ossification IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in osteoblast differentiation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in positive regulation of bone resorption IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    osteopontin
    Names
    SPP-1
    bone sialoprotein 1
    bone sialoprotein I
    early T-lymphocyte activation 1
    osteopontin-K
    secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174187.2NP_776612.1  osteopontin precursor

      See identical proteins and their annotated locations for NP_776612.1

      Status: PROVISIONAL

      Source sequence(s)
      M66236
      UniProtKB/TrEMBL
      Q2QCT5
      Conserved Domains (1) summary
      smart00017
      Location:17278
      OSTEO; Osteopontin

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037333.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      36693204..36700208 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024992984.2XP_024848752.1  osteopontin isoform X1

      UniProtKB/TrEMBL
      F1MI46
      Related
      ENSBTAP00000044782.4, ENSBTAT00000047589.4
      Conserved Domains (1) summary
      smart00017
      Location:17251
      OSTEO; Osteopontin