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    EFB1 translation elongation factor 1 subunit beta [ Nakaseomyces glabratus ]

    Gene ID: 2887849, updated on 6-Dec-2024

    Summary

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    Gene symbol
    EFB1
    Gene description
    translation elongation factor 1 subunit beta
    Locus tag
    GVI51_F08107
    See related
    FungiDB:GVI51_F08107; VEuPathDB:GVI51_F08107
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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    Genomic context

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    See EFB1 in Genome Data Viewer
    Location:
    chromosome: F
    Exon count:
    2
    Sequence:
    Chromosome: F; NC_088956.1 (875243..876281, complement)

    Chromosome F - NC_088956.1Genomic Context describing neighboring genes Neighboring gene GTP cyclohydrolase I Neighboring gene protein-lysine N-methyltransferase Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_088956.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • CAGL0F08547g
      Translation elongation factor eEF1beta; protein abundance decreased in ace2 mutant cells

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translational elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of eukaryotic translation elongation factor 1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    translation elongation factor 1 subunit beta
    XP_446340.1
    • CAGL0F08547g
      Translation elongation factor eEF1beta; protein abundance decreased in ace2 mutant cells

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_088956.1 Reference assembly

      Range
      875243..876281 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_446340.1 → XP_446340.1  translation elongation factor 1 subunit beta [Nakaseomyces glabratus]

      See identical proteins and their annotated locations for XP_446340.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0W0CE64, Q6FTV4
      Conserved Domains (3) summary
      cd00292
      Location:119 → 207
      EF1B; Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain. EF1B catalyzes the exchange of GDP bound to the G-protein, EF1A, for GTP, an important step in the elongation cycle of the protein biosynthesis. EF1A binds to and delivers the aminoacyl ...
      pfam10587
      Location:85 → 111
      EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
      cl02776
      Location:12 → 57
      GST_C_family; C-terminal, alpha helical domain of the Glutathione S-transferase family
    Nucleotide Protein
    Heading Accession and Version

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