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    DEHA2A00880g DEHA2A00880p [ Debaryomyces hansenii CBS767 ]

    Gene ID: 2899324, updated on 17-May-2024

    Summary

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    Gene symbol
    DEHA2A00880g
    Gene description
    DEHA2A00880p
    Locus tag
    DEHA2A00880g
    See related
    FungiDB:DEHA2A00880g; VEuPathDB:DEHA2A00880g
    Gene type
    protein coding
    RNA name
    DEHA2A00880p
    RefSeq status
    PROVISIONAL
    Organism
    Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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    Genomic context

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    See DEHA2A00880g in Genome Data Viewer
    Location:
    chromosome: A
    Exon count:
    1
    Sequence:
    Chromosome: A; NC_006043.2 (75344..77266, complement)

    Chromosome A - NC_006043.2Genomic Context describing neighboring genes Neighboring gene DEHA2A00836p Neighboring gene DEHA2A00858p Neighboring gene DEHA2A00902p Neighboring gene tRNA-Arg

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006043.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Mpp10 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of small-subunit processome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of sno(s)RNA-containing ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DEHA2A00880p
    XP_456376.2
    • similar to uniprot|P47083 Saccharomyces cerevisiae YJR002w MPP10 component of the U3 small nucleolar ribonucleoprotein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006043.2 Reference assembly

      Range
      75344..77266 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_456376.2 → XP_456376.2  DEHA2A00880p [Debaryomyces hansenii CBS767]

      See identical proteins and their annotated locations for XP_456376.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q6BZJ3
      Conserved Domains (1) summary
      pfam04006
      Location:21 → 614
      Mpp10; Mpp10 protein
    Nucleotide Protein
    Heading Accession and Version

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