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    DEHA2B01100g DEHA2B01100p [ Debaryomyces hansenii CBS767 ]

    Gene ID: 2913152, updated on 17-May-2024

    Summary

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    Gene symbol
    DEHA2B01100g
    Gene description
    DEHA2B01100p
    Locus tag
    DEHA2B01100g
    See related
    FungiDB:DEHA2B01100g; VEuPathDB:DEHA2B01100g
    Gene type
    protein coding
    RNA name
    DEHA2B01100p
    RefSeq status
    PROVISIONAL
    Organism
    Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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    Genomic context

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    See DEHA2B01100g in Genome Data Viewer
    Location:
    chromosome: B
    Exon count:
    1
    Sequence:
    Chromosome: B; NC_006044.2 (76432..82005)

    Chromosome B - NC_006044.2Genomic Context describing neighboring genes Neighboring gene DEHA2B01056p Neighboring gene DEHA2B01078p Neighboring gene DEHA2B01122p Neighboring gene DEHA2B01144p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006044.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables snoRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase I IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of 90S preribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of small-subunit processome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of t-UTP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DEHA2B01100p
    XP_457013.2
    • similar to uniprot|P42945 Saccharomyces cerevisiae YJL109C UTP10 nucleolar protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006044.2 Reference assembly

      Range
      76432..82005
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_457013.1 → XP_457013.2  DEHA2B01100p [Debaryomyces hansenii CBS767]

      See identical proteins and their annotated locations for XP_457013.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q6BXQ6
      Conserved Domains (2) summary
      smart01036
      Location:1571 → 1723
      BP28CT; BP28CT (NUC211) domain
      pfam12397
      Location:237 → 364
      U3snoRNP10; U3 small nucleolar RNA-associated protein 10
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6BXQ6.2

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