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    SJA_RS09045 site-specific integrase [ Sphingobium indicum UT26S ]

    Gene ID: 29273503, updated on 26-Dec-2024

    Summary

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    Gene symbol
    SJA_RS09045
    Gene description
    site-specific integrase
    Locus tag
    SJA_RS09045
    Gene type
    protein coding
    Organism
    Sphingobium indicum UT26S (strain: UT26S, culture-collection: NBRC:101211, type-material: type strain of Sphingobium japonicum)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium
    Old locus tag
    SJA_C1-19120
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    Genomic context

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    Location:
    chromosome: 1
    Sequence:
    Chromosome: 1; NC_014006.1 (1918319..1919731, complement)

    Chromosome 1 - NC_014006.1Genomic Context describing neighboring genes Neighboring gene DUF3526 domain-containing protein Neighboring gene TonB-dependent siderophore receptor Neighboring gene AlpA family phage regulatory protein Neighboring gene tRNA-Lys Neighboring gene Lrp/AsnC family transcriptional regulator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_014006.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of the representative γ-hexachlorocyclohexane-degrading bacterium Sphingobium japonicum UT26. Nagata Y, et al. J Bacteriol, 2010 Nov. PMID 20817768, Free PMC Article
    2. The integrase family of recombinase: organization and function of the active site. Grainge I, et al. Mol Microbiol, 1999 Aug. PMID 10577069
    3. Structure and mechanism in site-specific recombination. Gopaul DN, et al. Curr Opin Struct Biol, 1999 Feb. PMID 10047575
    4. The integrase family of tyrosine recombinases: evolution of a conserved active site domain. Esposito D, et al. Nucleic Acids Res, 1997 Sep 15. PMID 9278480, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    site-specific integrase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_014006.1 Reference assembly

      Range
      1918319..1919731 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_013040219.1 MULTISPECIES: site-specific integrase [Sphingobium]

      UniProtKB/TrEMBL
      D4Z2B4
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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