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    SJA_RS20160 YciI family protein [ Sphingobium indicum UT26S ]

    Gene ID: 29275700, updated on 26-Dec-2024

    Summary

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    Gene symbol
    SJA_RS20160
    Gene description
    YciI family protein
    Locus tag
    SJA_RS20160
    Gene type
    protein coding
    Organism
    Sphingobium indicum UT26S (strain: UT26S, culture-collection: NBRC:101211, type-material: type strain of Sphingobium japonicum)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium
    Old locus tag
    SJA_P1-01400
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    Genomic context

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    Location:
    plasmid: pCHQ1
    Sequence:
    NC_014007.1 (112047..112679, complement)

    NC_014007.1Genomic Context describing neighboring genes Neighboring gene PDR/VanB family oxidoreductase Neighboring gene 2,5-dichlorohydroquinone reductive dechlorinase Neighboring gene alpha/beta hydrolase Neighboring gene alpha/beta fold hydrolase Neighboring gene chlorohydroquinone/hydroquinone 1,2-dioxygenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_014007.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of the representative γ-hexachlorocyclohexane-degrading bacterium Sphingobium japonicum UT26. Nagata Y, et al. J Bacteriol, 2010 Nov. PMID 20817768, Free PMC Article
    2. New knowledge from old: in silico discovery of novel protein domains in Streptomyces coelicolor. Yeats C, et al. BMC Microbiol, 2003 Feb 6. PMID 12625841, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    YciI family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_014007.1 Reference assembly

      Range
      112047..112679 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_007686013.1 MULTISPECIES: YciI family protein [Sphingomonadaceae]

      See identical proteins and their annotated locations for WP_007686013.1

      UniProtKB/TrEMBL
      A0A126RE38, A0A126RXM9, A0A1L5BUW8, A0A2S8AZW6, A0A4Q4IWG8, A0A8E0WV32, D4Z910, M4S8J4, Q6VPF2, T0GGD3, T0GV92, T0KDD4
    Nucleotide Protein
    Heading Accession and Version