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    PASHI_RS03505 transglycosylase SLT domain-containing protein [ Pseudoalteromonas shioyasakiensis ]

    Gene ID: 29848189, updated on 19-May-2023

    Summary

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    Gene symbol
    PASHI_RS03505
    Gene description
    transglycosylase SLT domain-containing protein
    Locus tag
    PASHI_RS03505
    Gene type
    protein coding
    Organism
    Pseudoalteromonas shioyasakiensis (strain: JCM 18891, type-material: type strain of Pseudoalteromonas shioyasakiensis)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas
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    Genomic context

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    NZ_LRUE01000006.1Genomic Context describing neighboring genes Neighboring gene acetyl-CoA C-acyltransferase FadA Neighboring gene fatty acid oxidation complex subunit alpha FadB Neighboring gene Xaa-Pro dipeptidase Neighboring gene YigZ family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_LRUE01000006.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Lytic transglycosylases in macromolecular transport systems of Gram-negative bacteria. Koraimann G. Cell Mol Life Sci, 2003 Nov. PMID 14625683, Free PMC Article
    2. Structure of the 70-kDa soluble lytic transglycosylase complexed with bulgecin A. Implications for the enzymatic mechanism. Thunnissen AM, et al. Biochemistry, 1995 Oct 3. PMID 7548026
    3. A family of lysozyme-like virulence factors in bacterial pathogens of plants and animals. Mushegian AR, et al. Proc Natl Acad Sci U S A, 1996 Jul 9. PMID 8692991, Free PMC Article
    4. A conserved domain in putative bacterial and bacteriophage transglycosylases. Koonin EV, et al. Trends Biochem Sci, 1994 Mar. PMID 8203016

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    transglycosylase SLT domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_LRUE01000006.1 Reference assembly

      Range
      39727..41613
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_054563767.1 MULTISPECIES: transglycosylase SLT domain-containing protein [Pseudoalteromonas]

      UniProtKB/TrEMBL
      A0A2D4ZH36
      Conserved Domains (1) summary
      cl30778
      Location:1 → 619
      MltE; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis]