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    HYPBUDRAFT_8649 COX1-domain-containing protein [ Hyphopichia burtonii NRRL Y-1933 ]

    Gene ID: 30998330, updated on 18-Sep-2024

    Summary

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    Gene symbol
    HYPBUDRAFT_8649
    Gene description
    COX1-domain-containing protein
    Locus tag
    HYPBUDRAFT_8649
    Gene type
    protein coding
    RNA name
    COX1-domain-containing protein
    RefSeq status
    PROVISIONAL
    Organism
    Hyphopichia burtonii NRRL Y-1933 (strain: NRRL Y-1933)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Hyphopichia
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    Genomic context

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    See HYPBUDRAFT_8649 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_017963750.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017963750.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics of biotechnologically important yeasts. Riley R, et al. Proc Natl Acad Sci U S A, 2016 Aug 30. PMID 27535936, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytochrome-c oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in electron transport coupled proton transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    COX1-domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_017963750.1 Reference assembly

      Range
      66..641
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020223781.1 → XP_020073648.1  COX1-domain-containing protein, partial [Hyphopichia burtonii NRRL Y-1933]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1E4RBD5
      Conserved Domains (2) summary
      pfam14528
      Location:1 → 31
      LAGLIDADG_3; LAGLIDADG-like domain
      cl00275
      Location:51 → 97
      Heme_Cu_Oxidase_I; Heme-copper oxidase subunit I. Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which catalyze the reduction of O2 and simultaneously pump protons across the membrane. The superfamily is ...
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases