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    PPL_05784 NUDIX hydrolase family protein [ Polysphondylium pallidum PN500 ]

    Gene ID: 31361268, updated on 16-Nov-2023

    Summary

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    Gene symbol
    PPL_05784
    Gene description
    NUDIX hydrolase family protein
    Locus tag
    PPL_05784
    Gene type
    protein coding
    RNA name
    NUDIX hydrolase family protein
    RefSeq status
    PROVISIONAL
    Organism
    Polysphondylium pallidum PN500 (strain: PN500)
    Lineage
    Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium
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    Genomic context

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    See PPL_05784 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_008805089.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene BTB/POZ domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008805089.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogeny-wide analysis of social amoeba genomes highlights ancient origins for complex intercellular communication. Heidel AJ, et al. Genome Res, 2011 Nov. PMID 21757610, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NADH pyrophosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in NAD catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in NADH metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in NADP catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    NUDIX hydrolase family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_008805089.1 Reference assembly

      Range
      1408369..1409512
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020576657.1 → XP_020433906.1  NUDIX hydrolase family protein [Polysphondylium pallidum PN500]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D3BB52
      Conserved Domains (1) summary
      cl00447
      Location:163 → 294
      Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...
    Nucleotide Protein
    Heading Accession and Version