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    PNUC_RS07820 amino acid aminotransferase [ Polynucleobacter asymbioticus QLW-P1DMWA-1 ]

    Gene ID: 31481887, updated on 11-Dec-2024

    Summary

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    Gene symbol
    PNUC_RS07820
    Gene description
    amino acid aminotransferase
    Locus tag
    PNUC_RS07820
    Gene type
    protein coding
    Organism
    Polynucleobacter asymbioticus QLW-P1DMWA-1 (strain: QLW-P1DMWA-1, culture-collection: DSM:18221, type-material: type strain of Polynucleobacter necessarius subsp. asymbioticus)
    Lineage
    Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter
    Old locus tag
    Pnuc_1496
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    Genomic context

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    Sequence:
    NC_009379.1 (1572581..1573780)

    NC_009379.1Genomic Context describing neighboring genes Neighboring gene Fe-S cluster assembly transcription factor Neighboring gene excinuclease ABC subunit UvrB Neighboring gene polyhydroxyalkanoate depolymerase Neighboring gene electron transport complex subunit RsxB Neighboring gene endonuclease III

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009379.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The cloning and sequence analysis of the aspC and tyrB genes from Escherichia coli K12. Comparison of the primary structures of the aspartate aminotransferase and aromatic aminotransferase of E. coli with those of the pig aspartate aminotransferase isoenzymes. Fotheringham IG, et al. Biochem J, 1986 Mar 15. PMID 3521591, Free PMC Article
    2. Evolutionary relationships among pyridoxal-5'-phosphate-dependent enzymes. Regio-specific alpha, beta and gamma families. Alexander FW, et al. Eur J Biochem, 1994 Feb 1. PMID 8112347
    3. The passive yet successful way of planktonic life: genomic and experimental analysis of the ecology of a free-living polynucleobacter population. Hahn MW, et al. PLoS One, 2012. PMID 22448227, Free PMC Article
    4. Complete genome sequence of Polynucleobacter necessarius subsp. asymbioticus type strain (QLW-P1DMWA-1(T)). Meincke L, et al. Stand Genomic Sci, 2012 Mar 19. PMID 22675600, Free PMC Article
    5. The molecular evolution of pyridoxal-5'-phosphate-dependent enzymes. Mehta PK, et al. Adv Enzymol Relat Areas Mol Biol, 2000. PMID 10800595

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    amino acid aminotransferase
    WP_011903333.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009379.1 Reference assembly

      Range
      1572581..1573780
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011903333.1 amino acid aminotransferase [Polynucleobacter asymbioticus]

      UniProtKB/TrEMBL
      A4SYZ6
      Conserved Domains (2) summary
      PRK09257
      Location:3 → 398
      PRK09257; aromatic amino acid aminotransferase; Provisional
      pfam00155
      Location:28 → 394
      Aminotran_1_2; Aminotransferase class I and II
    Nucleotide Protein
    Heading Accession and Version