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    LSE_RS01770 RNA polymerase sigma factor [ Listeria seeligeri serovar 1/2b str. SLCC3954 ]

    Gene ID: 32490489, updated on 13-Dec-2024

    Summary

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    Gene symbol
    LSE_RS01770
    Gene description
    RNA polymerase sigma factor
    Locus tag
    LSE_RS01770
    Gene type
    protein coding
    Organism
    Listeria seeligeri serovar 1/2b str. SLCC3954 (strain: SLCC3954, serovar: 1/2b, type-material: type strain of Listeria seeligeri)
    Lineage
    Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria
    Old locus tag
    lse_0343
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    Genomic context

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    Sequence:
    NC_013891.1 (367815..368318, complement)

    NC_013891.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene polysaccharide deacetylase family protein Neighboring gene DUF3298 and DUF4163 domain-containing protein Neighboring gene Crp/Fnr family transcriptional regulator Neighboring gene glycosyltransferase Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013891.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of Listeria seeligeri, a nonpathogenic member of the genus Listeria. Steinweg C, et al. J Bacteriol, 2010 Mar. PMID 20061480, Free PMC Article
    2. Eubacterial sigma-factors. Wösten MM. FEMS Microbiol Rev, 1998 Sep. PMID 9818380
    3. Sigma and RNA polymerase: an on-again, off-again relationship? Mooney RA, et al. Mol Cell, 2005 Nov 11. PMID 16285916

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    RNA polymerase sigma factor

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013891.1 Reference assembly

      Range
      367815..368318 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_012984842.1 RNA polymerase sigma factor [Listeria seeligeri]

      See identical proteins and their annotated locations for WP_012984842.1

      Conserved Domains (3) summary
      cd06171
      Location:108 → 155
      Sigma70_r4; Sigma70, region (SR) 4 refers to the most C-terminal of four conserved domains found in Escherichia coli (Ec) sigma70, the main housekeeping sigma, and related sigma-factors (SFs). A SF is a dissociable subunit of RNA polymerase, it directs bacterial or ...
      COG1595
      Location:1 → 162
      RpoE; DNA-directed RNA polymerase specialized sigma subunit, sigma24 family [Transcription]
      pfam04542
      Location:13 → 80
      Sigma70_r2; Sigma-70 region 2
    Nucleotide Protein
    Heading Accession and Version