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    EHI_077110 uncharacterized protein [ Entamoeba histolytica HM-1:IMSS ]

    Gene ID: 3409248, updated on 17-May-2024

    Summary

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    Gene symbol
    EHI_077110
    Gene description
    uncharacterized protein
    Locus tag
    EHI_077110
    See related
    AmoebaDB:EHI_077110; VEuPathDB:EHI_077110
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Entamoeba histolytica HM-1:IMSS (strain: HM-1:IMSS)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
    Old locus tag
    40.t00021
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    Genomic context

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    See EHI_077110 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_001914944.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene pre-mRNA cleavage factor I 25 kDa subunit, putative Neighboring gene pre-mRNA cleavage factor I 25 kDa subunit, putative Neighboring gene geranylgeranyl transferase beta subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001914944.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the protist parasite Entamoeba histolytica. Loftus B, et al. Nature, 2005 Feb 24. PMID 15729342
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mRNA cleavage factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_654937.1
    • encoded by transcript EHI_077110A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001914944.1 Reference assembly

      Range
      30528..31295
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_649845.1 → XP_654937.1  uncharacterized protein EHI_077110 [Entamoeba histolytica HM-1:IMSS]

      See identical proteins and their annotated locations for XP_654937.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A175JPD3, A0A5K1UTU4, C4M2T1, M2Q305
      Conserved Domains (1) summary
      cl00447
      Location:57 → 250
      Nudix_Hydrolase; Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ ...
    Nucleotide Protein
    Heading Accession and Version

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