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    CG5050 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35048, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG5050provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032637
    Locus tag
    Dmel_CG5050
    See related
    AllianceGenome:FB:FBgn0032637
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5050
    Orthologs
    all
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    Genomic context

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    See CG5050 in Genome Data Viewer
    Location:
    36C9-36C9; 2-53 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (17452924..17458775)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (17452924..17458775)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene dorsal Neighboring gene long non-coding RNA:CR46204 Neighboring gene Serine protease homolog 93 Neighboring gene uncharacterized protein Neighboring gene Bicaudal D Neighboring gene small glutamine-rich tetratricopeptide containing protein Neighboring gene cassowary

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Translational control via protein-regulated upstream open reading frames. Medenbach J, et al. Cell, 2011 Jun 10. PMID 21663794
    2. EMC is required for biogenesis of Xport-A, an essential chaperone of Rhodopsin-1 and the TRP channel. Gaspar CJ, et al. EMBO Rep, 2022 Jan 5. PMID 34918864, Free PMC Article
    3. A gain-of-function screen for genes that influence axon guidance identifies the NF-kappaB protein dorsal and reveals a requirement for the kinase Pelle in Drosophila photoreceptor axon targeting. Mindorff EN, et al. Genetics, 2007 Aug. PMID 17603113, Free PMC Article
    4. Wake-up-call, a lin-52 paralogue, and Always early, a lin-9 homologue physically interact, but have opposing functions in regulating testis-specific gene expression. Doggett K, et al. Dev Biol, 2011 Jul 15. PMID 21570388, Free PMC Article
    5. A gain-of-function screen identifying genes required for vein formation in the Drosophila melanogaster wing. Molnar C, et al. Genetics, 2006 Nov. PMID 16980395, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: 17458171-17458381 mobile_element_type = transposon:INE-1{}3422

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5050-PA
    CG5050-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      17452924..17458775
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135995.4 → NP_609839.2  uncharacterized protein Dmel_CG5050, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609839.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T8T4, Q9VJD8
      Related
      FBpp0080534
      Conserved Domains (1) summary
      cl21478
      Location:96 → 197
      ATP-synt_B; ATP synthase B/B' CF(0)

    2. NM_001259127.2 → NP_001246056.1  uncharacterized protein Dmel_CG5050, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246056.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T8T4, Q9VJD8
      Conserved Domains (1) summary
      cl21478
      Location:96 → 197
      ATP-synt_B; ATP synthase B/B' CF(0)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8T8T4 Q8T8T4
    Q9VJD8 Q9VJD8

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