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    AFUA_3G11940 PHD finger domain protein, putative [ Aspergillus fumigatus Af293 ]

    Gene ID: 3511807, updated on 31-Oct-2024

    Summary

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    Gene symbol
    AFUA_3G11940
    Gene description
    PHD finger domain protein, putative
    Locus tag
    AFUA_3G11940
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Aspergillus fumigatus Af293 (strain: Af293)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
    Old locus tag
    Afu3g11940
    Orthologs
    all
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    Genomic context

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    See AFUA_3G11940 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_007196.1 (3137518..3139703, complement)

    Chromosome 3 - NC_007196.1Genomic Context describing neighboring genes Neighboring gene dihydrodipicolinate synthetase family protein Neighboring gene NAD binding Rossmann fold oxidoreductase, putative Neighboring gene hypothetical protein Neighboring gene transcription regulator PAB1642, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007196.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methylated histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Rpd3L complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of Rpd3L-Expanded complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PHD finger domain protein, putative
    XP_754428.1
    • encoded by transcript AFUA_3G11940A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007196.1 Reference assembly

      Range
      3137518..3139703 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_749335.1 → XP_754428.1  PHD finger domain protein, putative [Aspergillus fumigatus Af293]

      See identical proteins and their annotated locations for XP_754428.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B0XX92, Q4WY63
      Conserved Domains (3) summary
      PHA03247
      Location:414 → 582
      PHA03247; large tegument protein UL36; Provisional
      COG5034
      Location:521 → 692
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd17017
      Location:34 → 133
      ING_Yng1p; Inhibitor of growth (ING) domain of yeast Yng1p and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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