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    CG6329 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36529, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6329provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033872
    Locus tag
    Dmel_CG6329
    See related
    AllianceGenome:FB:FBgn0033872
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6329
    Summary
    Predicted to be involved in regulation of cholinergic synaptic transmission and sleep. Predicted to be active in plasma membrane. Is expressed in several structures, including adult head; adult heart; central brain primordium; embryonic central brain neurons; and ganglia. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

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    See CG6329 in Genome Data Viewer
    Location:
    50C6-50C6; 2-68 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (13826371..13833503)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (9713876..9721008)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene female lethal d Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Cathepsin L2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of Lineage-Specific Cis-Regulatory Modules Associated with Variation in Transcription Factor Binding and Chromatin Activity Using Ornstein-Uhlenbeck Models. Naval-Sánchez M, et al. Mol Biol Evol, 2015 Sep. PMID 25944915, Free PMC Article
    2. Comparative motif discovery combined with comparative transcriptomics yields accurate targetome and enhancer predictions. Naval-Sánchez M, et al. Genome Res, 2013 Jan. PMID 23070853, Free PMC Article
    3. boudin is required for septate junction organisation in Drosophila and codes for a diffusible protein of the Ly6 superfamily. Hijazi A, et al. Development, 2009 Jul. PMID 19502482
    4. Gene expression profiling of brakeless mutant Drosophila embryos. Crona F, et al. Data Brief, 2015 Dec. PMID 26509186, Free PMC Article
    5. Systematic screening of a Drosophila ORF library in vivo uncovers Wnt/Wg pathway components. Schertel C, et al. Dev Cell, 2013 Apr 29. PMID 23583758

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in positive regulation of voltage-gated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of synaptic transmission, cholinergic IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in sleep IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6329-PA
    CG6329-PB
    CG6329-PC
    CG6329-PD
    CG6329-PE
    CG6329-PF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      13826371..13833503
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299464.1 → NP_001286393.1  uncharacterized protein Dmel_CG6329, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286393.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K188
      Conserved Domains (1) summary
      pfam17064
      Location:24 → 120
      QVR; Sleepless protein

    2. NM_166011.3 → NP_725328.1  uncharacterized protein Dmel_CG6329, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725328.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K188
      Related
      FBpp0086759
      Conserved Domains (1) summary
      pfam17064
      Location:24 → 120
      QVR; Sleepless protein

    3. NM_137060.3 → NP_610904.1  uncharacterized protein Dmel_CG6329, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610904.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K188
      Related
      FBpp0086760
      Conserved Domains (1) summary
      pfam17064
      Location:24 → 120
      QVR; Sleepless protein

    4. NM_166012.3 → NP_725329.1  uncharacterized protein Dmel_CG6329, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725329.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K188
      Related
      FBpp0086761
      Conserved Domains (1) summary
      pfam17064
      Location:24 → 120
      QVR; Sleepless protein

    5. NM_176169.2 → NP_788349.1  uncharacterized protein Dmel_CG6329, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788349.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K188
      Related
      FBpp0086762
      Conserved Domains (1) summary
      pfam17064
      Location:24 → 120
      QVR; Sleepless protein

    6. NM_001299465.1 → NP_001286394.1  uncharacterized protein Dmel_CG6329, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286394.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K188
      Conserved Domains (1) summary
      pfam17064
      Location:24 → 120
      QVR; Sleepless protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7K188 Q7K188

    Gene LinkOut

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