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    HAT1 histone acetyltransferase 1 [ Gallus gallus (chicken) ]

    Gene ID: 374037, updated on 17-Aug-2024

    Summary

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    Symbol
    HAT1provided by CGNC
    Full Name
    histone acetyltransferase 1provided by CGNC
    Primary source
    CGNC:7250
    See related
    Ensembl:ENSGALG00010022770
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See HAT1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (17516996..17537720, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (17435504..17456244, complement)

    Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene methionyl aminopeptidase type 1D, mitochondrial Neighboring gene distal-less homeobox 1 Neighboring gene solute carrier family 25 member 12 Neighboring gene dynein cytoplasmic 1 intermediate chain 2 Neighboring gene methyltransferase like 8 Neighboring gene cytochrome b reductase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Histone acetyltransferase-1 regulates integrity of cytosolic histone H3-H4 containing complex. Barman HK, et al. Biochem Biophys Res Commun, 2008 Sep 5. PMID 18601901
    2. Leucine zipper motif of chicken histone acetyltransferase-1 is essential for in vivo and in vitro interactions with the p48 subunit of chicken chromatin assembly factor-1. Ahmad A, et al. Nucleic Acids Res, 2001 Feb 1. PMID 11160883, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone H4 acetyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in subtelomeric heterochromatin formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone acetyltransferase type B catalytic subunit
    NP_001383415.1
    NP_001383416.1
    NP_001383417.1
    NP_001383418.1
    NP_001383419.1
    NP_989538.2
    XP_046776807.1
    XP_046799327.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001396486.1 → NP_001383415.1  histone acetyltransferase type B catalytic subunit isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000236
      UniProtKB/TrEMBL
      Q9DFS5

    2. NM_001396487.1 → NP_001383416.1  histone acetyltransferase type B catalytic subunit isoform 3

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000236
      UniProtKB/TrEMBL
      A0A8V0ZRQ2, Q9DFS5

    3. NM_001396488.1 → NP_001383417.1  histone acetyltransferase type B catalytic subunit isoform 4

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000236
      UniProtKB/TrEMBL
      Q9DFS5

    4. NM_001396489.1 → NP_001383418.1  histone acetyltransferase type B catalytic subunit isoform 3

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000236
      UniProtKB/TrEMBL
      A0A8V0ZRQ2, Q9DFS5
      Related
      ENSGALP00010033508.1, ENSGALT00010055349.1

    5. NM_001396490.1 → NP_001383419.1  histone acetyltransferase type B catalytic subunit isoform 3

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000236
      UniProtKB/TrEMBL
      A0A8V0ZRQ2, Q9DFS5

    6. NM_204207.2 → NP_989538.2  histone acetyltransferase type B catalytic subunit isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000236
      UniProtKB/TrEMBL
      F1P5A3, Q9DFS5
      Related
      ENSGALP00010033521.1, ENSGALT00010055364.1

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      17516996..17537720 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046943371.1 → XP_046799327.1  histone acetyltransferase type B catalytic subunit isoform X1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      17435504..17456244 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046920851.1 → XP_046776807.1  histone acetyltransferase type B catalytic subunit isoform X1

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials