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    CG12017 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38404, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG12017provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035429
    Locus tag
    Dmel_CG12017
    See related
    AllianceGenome:FB:FBgn0035429
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12017
    Summary
    Is expressed in embryonic dorsal epidermis; embryonic head epidermis; and embryonic ventral epidermis. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG12017 in Genome Data Viewer
    Location:
    63C5-63C5; 3-7 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (3280239..3290896)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (3280239..3290896)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene mir-955 stem loop

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Viability, longevity, and egg production of Drosophila melanogaster are regulated by the miR-282 microRNA. Vilmos P, et al. Genetics, 2013 Oct. PMID 23852386, Free PMC Article
    2. Colonization of heterochromatic genes by transposable elements in Drosophila. Dimitri P, et al. Mol Biol Evol, 2003 Apr. PMID 12654931
    3. RNAi experiments in D. melanogaster: solutions to the overlooked problem of off-targets shared by independent dsRNAs. Seinen E, et al. PLoS One, 2010 Oct 1. PMID 20957038, Free PMC Article
    4. Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization. Menoret D, et al. Genome Biol, 2013 Aug 23. PMID 23972280, Free PMC Article
    5. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: 3281503-3281930 mobile_element_type = transposon:Doc{}918

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12017-PA
    CG12017-PB
    CG12017-PC
    CG12017-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      3280239..3290896
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001259666.2 → NP_001246595.1  uncharacterized protein Dmel_CG12017, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246595.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NFK8, Q8MRG7

    2. NM_139541.3 → NP_647798.1  uncharacterized protein Dmel_CG12017, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647798.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MRG7, Q9VZR7
      Related
      FBpp0072916

    3. NM_001259668.2 → NP_001246597.1  uncharacterized protein Dmel_CG12017, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246597.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NEZ6, Q8MRG7

    4. NM_001259667.2 → NP_001246596.1  uncharacterized protein Dmel_CG12017, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246596.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9ND35, Q8MRG7
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9ND35 M9ND35
    M9NEZ6 M9NEZ6
    M9NFK8 M9NFK8
    Q8MRG7 Q8MRG7
    Q9VZR7 Q9VZR7

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